4BES

Crystal structure of the Legionella pneumophila FIC domain-containing effector AnkX protein in complex with cytidine monophosphate and phosphocholine

Structural Biology Knowledgebase: 4BES SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BES

Classification: TRANSFERASE

Total Structure Weight: 55685.83

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOCHOLINE TRANSFERASE ANKX A 484 Legionella pneumophila EC#: 2.7.1 IUBMB
Fragment: FIC AND ANKYRIN REPEATS DOMAINS, RESIDUES 2-484
Mutation: L247P
Gene Name(s): ankX legA8 lpg0695

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C5P
Query on C5P

A CYTIDINE-5'-MONOPHOSPHATE
C9 H14 N3 O8 P
IERHLVCPSMICTF-XVFCMESISA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PC
Query on PC

A PHOSPHOCHOLINE
C5 H15 N O4 P
YHHSONZFOIEMCP-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.200
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.28 α = 90.00
b = 122.30 β = 90.00
c = 54.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-12
  • Released Date: 2013-04-24
  • Deposition author(s): Campanacci, V., Mukherjee, S., Roy, C.R., Cherfils, J.

Revision History

  • 2013-05-29
    Type: Citation | Details: JRNL