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Thaumatin from Thaumatococcus daniellii structure in complex with the europium tris-hydroxymethyltriazoledipicolinate complex at 1.30 A resolution.
4BAL
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Plant Protein
    Structure Weight: 23171.75
    Molecule: THAUMATIN-1
    Polymer: 1 Type: protein Length: 207
    Chains: A
    Organism: Thaumatococcus daniellii
    UniProtKB: Protein Feature View | Search PDB | P02883  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Thaumatococcus daniellii   Taxonomy   Common Name: Katemfe, miracle fruit  
     
  •   Related PDB Entries Hide
    Identifier Details
    1KWN  1.2 A STRUCTURE OF THAUMATIN CRYSTALLIZED IN GEL 
    1LR2  CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC PRESSURE 
    1LR3  CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC PRESSURE 
    1LXZ  STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE OF GLYCEROL 
    1LY0  STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE OF GLYCEROL 
    1PP3  STRUCTURE OF THAUMATIN IN A HEXAGONAL SPACE GROUP 
    1RQW  THAUMATIN STRUCTURE AT 1.05 A RESOLUTION 
    1THI  THAUMATIN I 
    1THU  THAUMATIN ISOFORM B (MONOCLINIC CRYSTAL FORM) 
    1THV  THAUMATIN ISOFORM A (ORTHORHOMBIC CRYSTAL FORM) 
    1THW  THAUMATIN (TETRAGONAL CRYSTAL FORM) 
    2A7I  ON THE ROUTINE USE OF SOFT X-RAYS IN MACROMOLECULAR CRYSTALLOGRAPHY, PART III- THE OPTIMAL DATA COLLECTION WAVELENGTH 
    2BLR  THAUMATIN BEFORE A HIGH DOSE X-RAY "BURN" 
    2BLU  THAUMATIN AFTER A HIGH DOSE X-RAY "BURN" 
    2D8O  STRUCTURE OF VIL-THAUMATIN 
    2D8P  STRUCTURE OF HYPER-VIL-THAUMATIN 
    2VHK  ATOMIC RESOLUTION (0.94 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 22C 
    2VHR  ATOMIC RESOLUTION (0.95A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 4 C 
    2VI1  ATOMIC RESOLUTION (1.04 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 22 C. 
    2VI2  ATOMIC RESOLUTION (1.05 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 4C 
    2VI3  ATOMIC RESOLUTION (0.98 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 20 C 
    2VI4  ATOMIC RESOLUTION (1.10 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 6 C. 
    2VU6  ATOMIC RESOLUTION (0.95 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 19 C. 
    2VU7  ATOMIC RESOLUTION (1.08 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 4 C 
    2WBZ  1.6 A STRUCTURE OF THAUMATIN CRYSTALLIZED WITHOUT TARTRATE AT 4 C 
    4AXR  CRYSTAL STRUCTURE OF THAUMATIN FROM A AUTO-HARVESTED CRYSTAL 
    4AXU  CRYSTAL STRUCTURE OF THAUMATIN FROM AN AUTO-HARVESTED CRYSTAL, CONTROL EXPERIMENT 
    4BAR  THAUMATIN FROM THAUMATOCOCCUS DANIELLII STRUCTURE IN COMPLEX WITH THE EUROPIUM TRIS- HYDROXYETHYLTRIAZOLEDIPICOLINATE COMPLEX AT 1.20 A RESOLUTION. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EU3
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    EU3 Eu
    EUROPIUM (III) ION
    HM6
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    HM6 C10 H8 N4 O5
    4-(4-(hydroxymethyl)-1h-1,2,3-triazol-1-yl)pyridine- 2,6-dicarboxylic acid
    HM6:4BAL
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Talon, R.,  Kahn, R.,  Gautier, A.,  Nauton, L.,  Girard, E.

    Deposition:   2012-09-14
    Release:   2012-11-14
    Last Modified (REVDAT):   2012-11-28
     
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    2012-11-28
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.30
    R-Value: 0.136 (obs.)
    R-Free: 0.157
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 57.99 α = 90.00 
    b = 57.99 β = 90.00 
    c = 150.18 γ = 90.00