Thaumatin from Thaumatococcus daniellii structure in complex with the europium tris-hydroxymethyltriazoledipicolinate complex at 1.30 A resolution.
4BAL
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Plant Protein
    Structure Weight: 23171.75
    Molecule: THAUMATIN-1
    Polymer: 1 Type: protein Length: 207
    Chains: A
    Organism: Thaumatococcus daniellii
    UniProtKB: Protein Feature View | Search PDB | P02883  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Thaumatococcus daniellii   Taxonomy   Common Name: Katemfe, miracle fruit  
     
  •   Related PDB Entries Hide
    Identifier Details
    1KWN   1.2 A STRUCTURE OF THAUMATIN CRYSTALLIZED IN GEL 
    1LR2   CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC PRESSURE 
    1LR3   CRYSTAL STRUCTURE OF THAUMATIN AT HIGH HYDROSTATIC PRESSURE 
    1LXZ   STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE OF GLYCEROL 
    1LY0   STRUCTURE OF THAUMATIN CRYSTALLIZED IN THE PRESENCE OF GLYCEROL 
    1PP3   STRUCTURE OF THAUMATIN IN A HEXAGONAL SPACE GROUP 
    1RQW   THAUMATIN STRUCTURE AT 1.05 A RESOLUTION 
    1THI   THAUMATIN I 
    1THU   THAUMATIN ISOFORM B (MONOCLINIC CRYSTAL FORM) 
    1THV   THAUMATIN ISOFORM A (ORTHORHOMBIC CRYSTAL FORM) 
    1THW   THAUMATIN (TETRAGONAL CRYSTAL FORM) 
    2A7I   ON THE ROUTINE USE OF SOFT X-RAYS IN MACROMOLECULAR CRYSTALLOGRAPHY, PART III- THE OPTIMAL DATA COLLECTION WAVELENGTH 
    2BLR   THAUMATIN BEFORE A HIGH DOSE X-RAY "BURN" 
    2BLU   THAUMATIN AFTER A HIGH DOSE X-RAY "BURN" 
    2D8O   STRUCTURE OF VIL-THAUMATIN 
    2D8P   STRUCTURE OF HYPER-VIL-THAUMATIN 
    2VHK   ATOMIC RESOLUTION (0.94 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 22C 
    2VHR   ATOMIC RESOLUTION (0.95A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 4 C 
    2VI1   ATOMIC RESOLUTION (1.04 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 22 C. 
    2VI2   ATOMIC RESOLUTION (1.05 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM D-TARTRATE AT 4C 
    2VI3   ATOMIC RESOLUTION (0.98 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 20 C 
    2VI4   ATOMIC RESOLUTION (1.10 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM DL-TARTRATE AT 6 C. 
    2VU6   ATOMIC RESOLUTION (0.95 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 19 C. 
    2VU7   ATOMIC RESOLUTION (1.08 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 4 C 
    2WBZ   1.6 A STRUCTURE OF THAUMATIN CRYSTALLIZED WITHOUT TARTRATE AT 4 C 
    4AXR   CRYSTAL STRUCTURE OF THAUMATIN FROM A AUTO-HARVESTED CRYSTAL 
    4AXU   CRYSTAL STRUCTURE OF THAUMATIN FROM AN AUTO-HARVESTED CRYSTAL, CONTROL EXPERIMENT 
    4BAR   THAUMATIN FROM THAUMATOCOCCUS DANIELLII STRUCTURE IN COMPLEX WITH THE EUROPIUM TRIS- HYDROXYETHYLTRIAZOLEDIPICOLINATE COMPLEX AT 1.20 A RESOLUTION. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EU3
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    EU3 Eu
    EUROPIUM (III) ION
    HM6
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    HM6 C10 H8 N4 O5
    4-(4-(hydroxymethyl)-1h-1,2,3-triazol-1-yl)pyridine- 2,6-dicarboxylic acid
    HM6:4BAL
     
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Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Talon, R.,  Kahn, R.,  Gautier, A.,  Nauton, L.,  Girard, E.

    Deposition:   2012-09-14
    Release:   2012-11-14
    Last Modified (REVDAT):   2012-11-28
     
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    2012-11-28
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.30
    R-Value: 0.136 (obs.)
    R-Free: 0.157
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 57.99 α = 90.00 
    b = 57.99 β = 90.00 
    c = 150.18 γ = 90.00