4BAD

Hen egg-white lysozyme structure in complex with the europium tris- hydroxymethyltriazoledipicolinate complex at 1.35 A resolution.

Structural Biology Knowledgebase: 4BAD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.152

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BAD

Classification: HYDROLASE

Total Structure Weight: 16009.65

Macromolecule Entities
Molecule Chains Length Organism Details
LYSOZYME C A 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Gene Name(s): LYZ Gene View

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
EU3
Query on EU3

A EUROPIUM (III) ION
Eu
LNBHUCHAFZUEGJ-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
HM6
Query on HM6

A 4-(4-(hydroxymethyl)-1h-1,2,3-triazol-1-yl)pyridine- 2,6-dicarboxylic acid
HYDROXYMETHYLTRIAZOLE DIPICOLINIC ACID (Synonym)
C10 H8 N4 O5
JVQVNGYGRNAVBP-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.152
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 77.40 α = 90.00
b = 77.40 β = 90.00
c = 38.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-13
  • Released Date: 2012-11-14
  • Deposition author(s): Talon, R., Kahn, R., Gautier, A., Nauton, L., Girard, E.

Revision History

  • 2015-03-25
    Type: Citation | Details: JRNL
  • 2012-11-28
    Type: Citation | Details: JRNL