4AR6

X-ray crystallographic structure of the reduced form perdeuterated Pyrococcus furiosus rubredoxin at 295 K (in quartz capillary) to 0.92 Angstroms resolution.

Structural Biology Knowledgebase: 4AR6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.92 Å
  • R-Value Free: 0.136
  • R-Value Work: 0.128

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AR6

Classification: ELECTRON TRANSPORT

Total Structure Weight: 6087.62

Macromolecule Entities
Molecule Chains Length Organism Details
RUBREDOXIN A 54 Pyrococcus furiosus Details: REDUCED STATE (FE II)
Gene Name(s): rub PF1282

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DOD
Query on DOD

A DEUTERATED WATER
D2 O
XLYOFNOQVPJJNP-ZSJDYOACSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.92 Å
  • R-Value Free: 0.136
  • R-Value Work: 0.128
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 34.38 α = 90.00
b = 35.18 β = 90.00
c = 43.94 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-20
  • Released Date: 2012-12-19
  • Deposition author(s): Cuypers, M.G., Mason, S.A., Blakeley, M.P., Mitchell, E.P., Haertlein, M., Forsyth, V.T.

Revision History

  • 2013-01-30
    Type: Citation | Details: JRNL