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Crystal structure of C-MET kinase domain in complex with 4-(3-((1H- pyrrolo(2,3-b)pyridin-3-yl)methyl)-(1,2,4)triazolo(4,3-b)(1,2,4) triazin-6-yl)benzonitrile
4AOI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 35232.06
    Molecule: HEPATOCYTE GROWTH FACTOR RECEPTOR
    Polymer: 1 Type: protein Length: 306
    Chains: A
    EC#: 2.7.10.1   
    Fragment: TYROSINE KINASE DOMAIN, RESIDUES 1051-1348
    Organism Homo sapiens
    Gene Name MET
    UniProtKB:   Protein Feature View | Search PDB | P08581  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    1FYR  DIMER FORMATION THROUGH DOMAIN SWAPPING IN THE CRYSTALSTRUCTURE OF THE GRB2-SH2 AC-PYVNV COMPLEX 
    1R0P  CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THEHEPATOCYTE GROWTH FACTOR RECEPTOR C-MET IN COMPLEX WITHTHE MICROBIAL ALKALOID K-252A 
    1R1W  CRYSTAL STRUCTURE OF THE TYROSINE KINASE DOMAIN OF THEHEPATOCYTE GROWTH FACTOR RECEPTOR C-MET 
    1SHY  THE CRYSTAL STRUCTURE OF HGF BETA-CHAIN IN COMPLEX WITH THESEMA DOMAIN OF THE MET RECEPTOR. 
    1SSL  SOLUTION STRUCTURE OF THE PSI DOMAIN FROM THE MET RECEPTOR 
    1UX3  3D STRUCTURE PREDICTION OF AMINO ACIDS 25 TO 656 OF HUMAN HEPATOCYTE GROWTH FACTOR/SCATTER FACTOR (MET) RECEPTOR 
    2CEW  3D STRUCTURE PREDICTION OF THE IG2-IG4 DOMAINS OF THE ECTODOMAIN REGION OF THE HUMAN HEPATOCYTE GROWTH FACTOR-SCATTER FACTOR RECEPTOR, MET 
    2G15  STRUCTURAL CHARACTERIZATION OF AUTOINHIBITED C-MET KINASE 
    2UZX  STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: CRYSTAL FORM I 
    2UZY  STRUCTURE OF THE HUMAN RECEPTOR TYROSINE KINASE MET IN COMPLEX WITH THE LISTERIA MONOCYTOGENES INVASION PROTEIN INLB: LOW RESOLUTION, CRYSTAL FORM II 
    2WD1  HUMAN C-MET KINASE IN COMPLEX WITH AZAINDOLE INHIBITOR 
    2WGJ  X-RAY STRUCTURE OF PF-02341066 BOUND TO THE KINASE DOMAIN OF C-MET 
    2WKM  X-RAY STRUCTURE OF PHA-00665752 BOUND TO THE KINASE DOMAIN OF C-MET 
    3ZXZ  X-RAY STRUCTURE OF PF-04217903 BOUND TO THE KINASE DOMAIN OF C-MET 
    3ZZE  CRYSTAL STRUCTURE OF C-MET KINASE DOMAIN IN COMPLEX WITH N'-((3Z)-4-CHLORO-7-METHYL-2-OXO-1,2- DIHYDRO-3H-INDOL-3-YLIDENE)-2-(4-HYDROXYPHENYL) PROPANOHYDRAZIDE 
    4AP7  CRYSTAL STRUCTURE OF C-MET KINASE DOMAIN IN COMPLEX WITH 4-((6-(4-FLUOROPHENYL)-(1,2,4)TRIAZOLO(4,3- B)(1,2,4)TRIAZIN-3-YL)METHYL)PHENOL 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    4K0
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    4K0 C19 H12 N8
    4-[3-(1H-pyrrolo[2,3-b]pyridin-3-ylmethyl)- [1,2,4]triazolo[4,3-b][1,2,4]triazin-6-yl]benzenecarbonitrile
    4K0:4AOI
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    4K0
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    4K0
    IC50: 16 nM (99) - data from BindingDB  
    Ki: 4 nM (99) - data from BindingDB  
    Ki: 4 nM - data from BindingMOAD  
    Ki: 4 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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