4ALV

Benzofuropyrimidinone Inhibitors of Pim-1

Structural Biology Knowledgebase: 4ALV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.59 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.192

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4ALV

Classification: TRANSFERASE

Total Structure Weight: 38114.87

Macromolecule Entities
Molecule Chains Length Organism Details
SERINE/THREONINE-PROTEIN KINASE PIM-1 A 328 Homo sapiens EC#: 2.7.11.1 IUBMB
Gene Name(s): PIM1 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IMD
Query on IMD

A IMIDAZOLE
C3 H5 N2
RAXXELZNTBOGNW-UHFFFAOYSA-O
Ligand Explorer
 
JSmol
R9P
Query on R9P

A 8-bromo-2-{2-chloro-4-[(piperidin-4-ylmethyl)amino]phenyl}[1]benzofuro[3,2- d]pyrimidin-4(3H)-one
C22 H20 Br Cl N4 O2
RUIXFIILMZVAAF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
R9P N/A in BindingDB
N/A in BindingMoad
IC50: 7 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.59 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.192
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 96.87 α = 90.00
b = 96.87 β = 90.00
c = 80.84 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-05
  • Released Date: 2013-01-16
  • Deposition author(s): Stout, T.J., Adams, L.

Revision History

No revisions since initial release