Crystal Structure of Fucose binding lectin from Aspergillus Fumigatus (AFL) in complex with LewisY tetrasaccharide. DOI:10.2210/pdb4ah5/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Sugar Binding Protein Structure Weight: 74241.29 Molecule: FUCOSE-SPECIFIC LECTIN FLEA Polymer: 1 Type: protein Length: 315 Chains: A, B Organism Aspergillus fumigatus Gene Name AFUA_5G14740 UniProtKB:   Protein Feature View | Search PDB | Q4WW81         Source Hide Polymer: 1 Scientific Name: Aspergillus fumigatus   Taxonomy   Expression System: Escherichia coli   Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Synthetic construct   Taxonomy     Polymer: 6 Scientific Name: Synthetic construct   Taxonomy     Polymer: 7 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 4AGI  CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH SELENO FUCOSIDE.  4AGT  CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH FUC1-6GLCNAC .  4AH4  CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH BGA OLIGOSACCHARIDE.  4AHA  CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH FUCOSYLATED MONOSACCHARIDES (FUC1-2GAL, FUC1-3GLCNAC, FUC1-4GLCNAC AND FUC1-6GLCNAC)  4AHB  CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH L- GALACTOPYRANOSE.      Ligand Chemical Component Hide Identifier Formula Name Interactions FUC Search  Download  C6 H12 O5 ALPHA-L-FUCOSE   Ligand Explorer GAL Search  Download  C6 H12 O6 BETA-D-GALACTOSE   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer NDG Search  Download  C8 H15 N O6 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type CSX Search  C3 H7 N O3 S CYS lPeptideLinking     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Houser, J.,  Komarek, J.,  Kostlanova, N.,  Lahmann, M.,  Cioci, G.,  Varrot, A.,  Imberty, A.,  Wimmerova, M. Deposition:   2012-02-03 Release:   2013-02-20     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.99 R-Value: 0.171 (obs.) R-Free: 0.225 Space Group: P 1 Unit Cell:   Length [Å] Angles [°] a = 47.32 α = 96.81  b = 47.53 β = 100.24  c = 77.36 γ = 113.61