A Detailed Study of Water Network in the Minor Groove of D(Cgcgaattcgcg)2 and D(Cgcaaatttgcg)2 in Presence of Linear Groove Binders
Munnur, D.G., Mitchell, E.P., Forsyth, V.T., Teixeira, S.C.M., Neidle, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*GP)-3' | 12 | synthetic construct | |||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
D2A Query on D2A | C [auth A] | 2-(4'-AMIDINOBIPHENYL-4-YL)-1H-BENZIMIDAZOLE-5-AMIDINE C21 H18 N6 MIMVUHYHAXPADM-UHFFFAOYSA-N | |||
MG Query on MG | D [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 23.622 | α = 90 |
b = 38.881 | β = 90 |
c = 62.66 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |