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Crystal structure of the FimX EAL domain in complex with reaction product pGpG
DOI:10.2210/pdb4afy/pdb   NDB ID: NA2167
4AFY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 61975.01
    Molecule: FIMX
    Polymer: 1 Type: protein Length: 274
    Chains: A, B
    EC#: 3.1.4.52   
    Fragment: EAL DOMAIN, RESIDUES 439-691
    Organism: Pseudomonas aeruginosa
    Gene Names: fimX PA4959
    UniProtKB: Protein Feature View | Search PDB | Q9HUK6  
    Molecule: 5'-R(*GP*GP)-3'
    Polymer: 2 Type: rna Length: 2
    Chains: C, D
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Pseudomonas aeruginosa   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    NA
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    NA Na
    SODIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2167
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Robert-Paganin, J.,  Nonin-Lecomte, S.,  Rety, S.

    Deposition:   2012-01-23
    Release:   2013-01-09
    Last Modified (REVDAT):   2013-01-30
     
  •   Revision History    Hide
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    2013-01-30
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.01
    R-Value: 0.210 (obs.)
    R-Free: 0.239
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 104.33 α = 90.00 
    b = 104.33 β = 90.00 
    c = 154.24 γ = 90.00