4AFJ

5-aryl-4-carboxamide-1,3-oxazoles: potent and selective GSK-3 inhibitors

Structural Biology Knowledgebase: 4AFJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.178

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AFJ

Classification: TRANSFERASE / PEPTIDE

Total Structure Weight: 92208.13

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCOGEN SYNTHASE KINASE-3 BETA A, B 367 Homo sapiens EC#: 2.7.11.26 IUBMB
Fragment: RESIDUES 27-393
Gene Name(s): GSK3B Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTO-ONCOGENE FRAT1 X, Y 30 Homo sapiens Fragment: RESIDUES 197-226
Gene Name(s): FRAT1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SJJ
Query on SJJ

A, B 5-(4-METHOXYPHENYL)-N-(PYRIDIN-4-YLMETHYL)- 1,3-OXAZOLE-4-CARBOXAMIDE
C17 H15 N3 O3
NDXJIXWTFPGHAI-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
SJJ IC50: 79 - 1995 nM (100) BindingDB

IC50: 400 nM  BindingMOAD
IC50: 398 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PTR
Query on PTR
A, B L-PEPTIDE LINKING C9 H12 N O6 P TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.178
  • Space Group: H 3 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 152.32 α = 90.00
b = 152.32 β = 90.00
c = 199.05 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-19
  • Released Date: 2012-02-29
  • Deposition author(s): Gentile, G., Merlo, G., Pozzan, A., Bernasconi, G., Bax, B., Bamborough, P., Bridges, A., Carter, P., Neu, M., Yao, G., Brough, C., Cutler, G., Coffin, A., Belyanskaya, S.

Revision History

  • 2012-03-07
    Type: Other | Details: Citation