CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-2 DOI:10.2210/pdb4abu/pdb

4ABU   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transport Protein Structure Weight: 27410.42 Molecule: TRANSTHYRETIN Polymer: 1 Type: protein Length: 124 Chains: A, B Fragment: RESIDUES 21-144 Organism Homo sapiens Gene Names TTR PALB UniProtKB:   Protein Feature View | Search PDB | P02766         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1BM7  HUMAN TRANSTHYRETIN (PREALBUMIN) COMPLEX WITH FLUFENAMIC ACID (2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID )  1BMZ  HUMAN TRANSTHYRETIN (PREALBUMIN)  1BZ8  TRANSTHYRETIN (DEL VAL122)  1BZD  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION  1BZE  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION  1DVQ  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN  1DVS  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH RESVERATROL  1DVT  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH FLURBIPROFEN  1DVU  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH DIBENZOFURAN- 4,6-DICARBOXYLIC ACID  1DVX  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH DICLOFENAC  1DVY  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH N-( M- TRIFLUOROMETHYLPHENYL) PHENOXAZINE-4,6-DICARBOXYLIC ACID  1DVZ  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH O- TRIFLUOROMETHYLPHENYL ANTHRANILIC ACID  1E3F  STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING  1E4H  STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING  1E5A  STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING  1ETA  TRANSTHYRETIN (PREALBUMIN) NATURALLY OCCURRING VARIANT WITH 1:1 MIX OF VAL AND MET AT POSITION 30 COMPLEXED WITH THYROXINE (3,5,3',5'-TETRAIODO-L-THYRONINE)  1ETB  TRANSTHYRETIN (PREALBUMIN) MUTANT WITH ALA 109 REPLACED BY THR (A109T) COMPLEXED WITH THYROXINE (3,5,3',5'- TETRAIODO-L-THYRONINE)  1F41  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN AT 1.5A RESOLUTION  1F64  LEU55PRO TTR-IDOX THEORETICAL MODEL  1F86  TRANSTHYRETIN THR119MET PROTEIN STABILISATION  1FH2  TRANSTHYRETIN STABILITY AS A KEY FACTOR IN AMYLOIDOGENESIS  1FHN  TRANSTHYRETIN STABILITY AS A KEY FACTOR IN AMYLOIDOGENESIS  1G1O  CRYSTAL STRUCTURE OF THE HIGHLY AMYLOIDOGENIC TRANSTHYRETINMUTANT TTR G53S/E54D/L55S  1GKO  AN ENGINEERED TRANSTHYRETIN MONOMER THAT IS NON- AMYLOIDOGENIC - UNLESS PARTIALLY DENATURED  1ICT  MONOCLINIC FORM OF HUMAN TRANSTHYRETIN COMPLEXED WITHTHYROXINE (T4)  1III  CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT TTR Y114C -DATA COLLECTED AT ROOM TEMPERATURE  1IIK  CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT TTR Y114C -DATA COLLECTED AT CRYO TEMPERATURE  1IJN  CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT TTR C10A/ Y114C  1QAB  THE STRUCTURE OF HUMAN RETINOL BINDING PROTEIN WITH ITSCARRIER PROTEIN TRANSTHYRETIN REVEALS INTERACTION WITH THECARBOXY TERMINUS OF RBP  1QWH  A COVALENT DIMER OF TRANSTHYRETIN THAT AFFECTS THE AMYLOIDPATHWAY  1RLB  RETINOL BINDING PROTEIN COMPLEXED WITH TRANSTHYRETIN 1RLB 3  1SOK  CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT A108Y/ L110ESOLVED IN SPACE GROUP P21212  1SOQ  CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT A108Y/ L110ESOLVED IN SPACE GROUP C2  1THA  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3,3 '-DIIODO-L-THYRONINE  1THC  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3',5 '-DIBROMO-2',4,4',6-TETRA-HYDROXYAURONE  1TLM  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH MILRINONE  1TSH  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION  1TT6  THE ORTHORHOMBIC CRYSTAL STRUCTURE OF TRANSTHYRETIN INCOMPLEX WITH DIETHYLSTILBESTROL  1TTA  TRANSTHYRETIN (FORMERLY PREALBUMIN)  1TTB  TRANSTHYRETIN (FORMERLY PREALBUMIN) MUTANT WITH ALA 109 REPLACED BY THR (A109T)  1TTC  TRANSTHYRETIN (FORMERLY PREALBUMIN) MUTANT WITH VAL 30 REPLACED BY MET (V30M)  1TTR  TRANSTHYRETIN - V/122/I CARDIOMYOPATHIC MUTANT  1TYR  TRANSTHYRETIN COMPLEX WITH RETINOIC ACID  1TZ8  THE MONOCLINIC CRYSTAL STRUTURE OF TRANSTHYRETIN IN COMPLEXWITH DIETHYLSTILBESTROL  1U21  TRANSTHYRETIN WITH TETHERED INHIBITOR ON ONE MONOMER.  1X7S  THE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF THE AMYLOIDOGENICVARIANT TTR TYR78PHE  1X7T  STRUCTURE OF TTR R104H: A NON-AMYLOIDOGENIC VARIANT WITHPROTECTIVE CLINICAL EFFECTS  1Y1D  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITHIODODIFLUNISAL  1Z7J  HUMAN TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3,3',5,5'-TETRAIODOTHYROACETIC ACID (T4AC)  1ZCR  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN WITH BOUND IODIDE  1ZD6  CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN WITH BOUND CHLORIDE  2B14  THE CRYSTAL STRUCTURE OF 2,4-DINITROPHENOL IN COMPLEX WITHTHE AMYLOIDOGENIC VARIANT TRANSTHYRETIN LEU 55 PRO  2B15  THE CRYSTAL STRUCTURE OF 2,4-DINITROPHENOL IN COMPLEX WITHHUMAN TRANSTHYRETIN  2B16  THE CRYSTAL STRUCTURE OF 2,4-DINITROPHENOL IN COMPLEX WITHTHE AMYLOIDOGENIC VARIANT TRANSTHYRETIN TYR78PHE  2B77  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH DIFLUNISALANALOGUES - TTR.2',4'-DICHLORO-4-HYDROXY-1,1'-BIPHENYL-3- CARBOXYLIC ACID  2B9A  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH DIFLUNISALANALOGUES - TTR.3',5'-DIFLUOROBIPHENYL-4-CARBOXYLIC ACID  2F7I  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH DIFLUNISALANALOGUES - TTR. 2',6'-DIFLUOROBIPHENYL-4-CARBOXYLIC ACID  2F8I  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH BENZOXAZOLE  2FBR  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH BIVALANT AMYLOIDINHIBITOR (4 CORBON LINKER)  2FLM  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH BIVALANT AMYLOIDINHIBITOR (6 CARBON LINKER)  2G5U  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH HYDROXYLATEDPOLYCHLORINATED BIPHENYL-4,4'-DIHYDROXY-3,3', 5,5'-TETRACHLOROBIPHENYL  2G9K  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH HYDROXYLATEDPOLYCHLORINATED BIPHENYL-4-HYDROXY-2',3,3',4 ',5-PENTACHLOROBIPHENYL  2GAB  HUMAN TRANSTHYRETIN (TTR) COMPLEXED WITH HYDROXYLATEDPOLYCHLORINATED BIPHENYL-4-HYDROXY-3,3',5,4 '-TETRACHLOROBIPHENYL  2PAB  PREALBUMIN (HUMAN PLASMA)  2ROX  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH THYROXINE (T4)  2ROY  TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3',5 '-DINITRO-N-ACETYL-L-THYRONINE  2TRH  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION  2TRY  TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION  2WQA  COMPLEX OF TTR AND RBP4 AND OLEIC ACID  4ABQ  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-1  4ABV  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-3  4ABW  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-6  4AC2  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-7  4AC4  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-18  4ACT  CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-17  4ANK  CRYSTALLOGRAPHIC STUDY OF NOVEL TRANSTHYRETIN LIGANDS EXHIBITING NEGATIVE-COOPERATIVITY BETWEEN TWO T4 BINDING SITES.  5TTR  LEU 55 PRO TRANSTHYRETIN CRYSTAL STRUCTURE      Ligand Chemical Component Hide Identifier Formula Name Interactions FT1 Search  Download  C13 H8 Cl2 O3 4-(2,4-dichlorophenoxy)-3-hydroxybenzaldehyde   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) FT1 Search  Download  IC50: 520 nM (100) - data from BindingDB   Kd: 13.9 nM (100) - data from BindingDB   N/A in BindingMoad N/A in PDBbind     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam   GO Terms: 10 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Tomar, D.,  Khan, T.,  Singh, R.R.,  Mishra, S.,  Gupta, S.,  Surolia, A.,  Salunke, D.M. Deposition:   2011-12-11 Release:   2012-09-26     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.86 R-Value: 0.208 (obs.) R-Free: 0.254 Space Group: P 21 21 2 Unit Cell:   Length [Å] Angles [°] a = 85.60 α = 90.00  b = 42.47 β = 90.00  c = 63.87 γ = 90.00      Molecule of the Month Hide Serum Albumin