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Crystal structure of the Ubl domain of Mdy2 (Get5) at 1.78A
4A20
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Binding
    Structure Weight: 11405.07
    Molecule: UBIQUITIN-LIKE PROTEIN MDY2
    Polymer: 1 Type: protein Length: 98
    Chains: A
    Fragment: GET5 UBL-LIKE DOMAIN, RESIDUES 70-152
    Organism: Saccharomyces cerevisiae
    Gene Names: MDY2 GET5 TMA24 YOL111C
    UniProtKB: Protein Feature View | Search PDB | Q12285  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2WPV  CRYSTAL STRUCTURE OF S. CEREVISIAE GET4-GET5 COMPLEX 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4
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    SO4 O4 S
    SULFATE ION
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Simon, A.C.,  Simpson, P.J.,  Murray, J.W.,  Isaacson, R.L.

    Deposition:   2011-09-21
    Release:   2012-11-14
    Last Modified (REVDAT):   2013-02-13
     
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    2013-02-13
    Citation
    2013-01-30
    Citation
    2013-01-16
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.78
    R-Value: 0.203 (obs.)
    R-Free: 0.248
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 47.19 α = 90.00 
    b = 47.19 β = 90.00 
    c = 78.41 γ = 120.00