3XIM

ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS

Structural Biology Knowledgebase: 3XIM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.149

Literature

Macromolecules
Sequence Display for 3XIM

Classification: ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)

Total Structure Weight: 175224.34

Macromolecule Entities
Molecule Chains Length Organism Details
D-XYLOSE ISOMERASE A, B, C, D 393 Actinoplanes missouriensis EC#: 5.3.1.5 IUBMB
Mutation: K309R, K319R, K323R
Gene Name(s): xylA XI AMIS_10350
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SOR
Query on SOR

A, B, C, D D-SORBITOL
C6 H14 O6
FBPFZTCFMRRESA-JGWLITMVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A, B, C, D COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.149
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 143.45 α = 90.00
b = 143.45 β = 90.00
c = 231.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1991-05-29
  • Released Date: 1993-04-15
  • Deposition author(s): Mrabet, N.T., Van Denbroek, A., Van Den Brande, I., Stanssens, P., Laroche, Y., Lambeir, A.-M., Matthyssens, G., Jenkins, J., Chiadmi, M., Vantilbeurgh, H., Rey, F., Janin, J., Quax, W.J., Lasters, I., Demaeyer, M., Wodak, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4