Crystal Structure of alpha-Amylase from Aspergillus oryzae
3VX1
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 52787.89
    Molecule: Alpha-amylase A type-1/2
    Polymer: 1 Type: protein Length: 478
    Chains: A
    EC#: 3.2.1.1   
    Organism: Aspergillus oryzae RIB40
    Gene Names: amy1 amyI Taa-G1 AO090023000944 amy2 amyII Taa-G2 AO090120000196
    UniProtKB: Protein Feature View | Search PDB | P0C1B3  
     
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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Aspergillus oryzae   Taxonomy   Common Name: Yellow koji mold  
     
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    Identifier Details
    3VX0    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
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    CA Ca
    CALCIUM ION
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Sugahara, M.

    Deposition:   2012-09-06
    Release:   2013-09-11
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.208 (obs.)
    R-Free: 0.247
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 50.37 α = 90.00 
    b = 66.68 β = 90.00 
    c = 131.55 γ = 90.00