3VNN

Crystal Structure of a sub-domain of the nucleotidyltransferase (adenylation) domain of human DNA ligase IV

Structural Biology Knowledgebase: 3VNN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.305
  • R-Value Work: 0.273

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VNN

Classification: LIGASE

Total Structure Weight: 16196.60

Macromolecule Entities
Molecule Chains Length Organism Details
DNA ligase 4 A 139 Homo sapiens EC#: 6.5.1.1 IUBMB
Fragment: A sub-domain of the nucleotidyltransferase (adenylation) domain, UNP residues 268-405
Gene Name(s): LIG4 Gene View


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.305
  • R-Value Work: 0.273
  • Space Group: P 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 39.09 α = 90.00
b = 39.09 β = 90.00
c = 197.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-17
  • Released Date: 2012-06-20
  • Deposition author(s): Ochi, T., Wu, Q., Chirgadze, D.Y., Grossmann, J.G., Bolanos-Garcia, V.M., Blundell, T.L.

Revision History

  • 2013-07-24
    Type: Citation | Details: Citation update