D-alanine--D-alanine ligase from Yersinia pestis DOI:10.2210/pdb3v4z/pdb

3V4Z   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ligase Structure Weight: 67160.90 Molecule: D-alanine--D-alanine ligase Polymer: 1 Type: protein Length: 309 Chains: A, B EC#: 6.3.2.4    Organism Yersinia pestis CO92 Gene Names ddl ddlB YPO0557 y3624 YP_3627 UniProtKB:   Protein Feature View | Search PDB | Q8ZIE7         Source Hide Polymer: 1 Scientific Name: Yersinia pestis   Taxonomy   Expression System: Escherichia coli       Ligand Chemical Component Hide Identifier Formula Name Interactions PEG Search  Download  C4 H10 O3 DI(HYDROXYETHYL)ETHER   Ligand Explorer PGE Search  Download  C6 H14 O4 TRIETHYLENE GLYCOL   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 4 Domains - data from Pfam   GO Terms: 10 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Osipiuk, J.,  Nocek, B.,  Mulligan, R.,  Papazisi, L.,  Anderson, W.F.,  Joachimiak, A.,  Center for Structural Genomics of Infectious Diseases Deposition:   2011-12-15 Release:   2011-12-28     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.69 R-Value: 0.209 (obs.) R-Free: 0.289 Space Group: P 31 2 1 Unit Cell:   Length [Å] Angles [°] a = 100.64 α = 90.00  b = 100.64 β = 90.00  c = 110.30 γ = 120.00