Download MendeleyCrystal structure of oxo-cupper clusters binding to ferric binding protein from Neisseria gonorrhoeae
Chen, W.J., Wang, H.F., Zhou, C.J., Ye, D.R., Huang, J., Tan, X.S., Zhong, W.Q.To be published.
3TYH
Crystal structure of oxo-cupper clusters binding to ferric binding protein from Neisseria gonorrhoeae
- PDB DOI: https://doi.org/10.2210/pdb3TYH/pdb
- Classification: METAL TRANSPORT
- Organism(s): Neisseria gonorrhoeae
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-09-26 Released: 2012-09-26
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.169
- R-Value Work: 0.143
- R-Value Observed: 0.144
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| FbpA protein | 309 | Neisseria gonorrhoeae | Mutation(s): 0 Gene Names: FbpA |  | |
UniProt | |||||
Find proteins for P17259 (Neisseria gonorrhoeae) Explore P17259 Go to UniProtKB: P17259 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P17259 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CU Query on CU | AA [auth I] J [auth A] K [auth A] L [auth B] M [auth B] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.169
- R-Value Work: 0.143
- R-Value Observed: 0.144
- Space Group: P 32
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 146.514 | α = 90 |
| b = 146.514 | β = 90 |
| c = 114.59 | γ = 120 |
| Software Name | Purpose |
|---|---|
| ADSC | data collection |
| PHASES | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2012-09-26 Deposition Author(s): Chen, W.J., Wang, H.F., Zhou, C.J., Ye, D.R., Huang, J., Tan, X.S., Zhong, W.Q.
Revision History (Full details and data files)
- Version 1.0: 2012-09-26
Type: Initial release - Version 1.1: 2023-11-01
Changes: Data collection, Database references, Derived calculations, Refinement description
