3TTJ

Crystal Structure of JNK3 complexed with CC-359, a JNK inhibitor for the prevention of ischemia-reperfusion injury

Structural Biology Knowledgebase: 3TTJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3TTJ

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 53068.31

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 10 A 464 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK10 Gene View JNK3 JNK3A PRKM10 SAPK1B

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
JBI
Query on JBI

A 9-cyclopentyl-N~8~-(2-fluorophenyl)-N~2~- (4-methoxyphenyl)-9H-purine-2,8-diamine
C23 H23 F N6 O
IMFVPVKPQOQCBY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
JBI IC50: 210 - 1100 nM (90 - 100) BindingDB

IC50: 210 nM  BindingMOAD
IC50: 210 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.202
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.17 α = 90.00
b = 70.73 β = 90.00
c = 106.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-09-14
  • Released Date: 2012-01-25
  • Deposition author(s): Plantevin-Krenitsky, V., Delgado, M., Nadolny, L., Sahasrabudhe, K., Ayala, S., Clareen, S., Hilgraf, R., Albers, R., Kois, A., Hughes, K., Wright, J., Nowakowski, J., Sudbeck, E., Ghosh, S., Bahmanyar, S., Chamberlain, P., Muir, J., Cathers, B.E., Giegel, D., Xu, L., Celeridad, M., Moghaddam, M., Khatsenko, O., Omholt, P., Katz, J., Pai, S., Fan, R., Tang, Y., Shirley, M.A., Benish, B., Blease, K., Raymon, H., Bhagwat, S., Bennett, B., Satoh, Y.

Revision History

  • 2012-02-08
    Type: Citation | Details: Citation update