Fragment based discovery and optimisation of bace-1 inhibitors DOI:10.2210/pdb3s2o/pdb

3S2O   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

ENTRY 3S2O SUPERSEDES 3MSM Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 46090.16 Molecule: Beta-secretase 1 Polymer: 1 Type: protein Length: 408 Chains: A EC#: 3.4.23.46    Fragment: UNP RESIDUES 46-453 Organism Homo sapiens Gene Names BACE1 BACE KIAA1149 UniProtKB:   Protein Feature View | Search PDB | P56817         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 3MSJ    3MSK    3MSL    3MSM        Ligand Chemical Component Hide Identifier Formula Name Interactions EV6 Search  Download  C22 H29 Cl N4 O (3S)-3-(2-amino-5-chloro-1H-benzimidazol- 1-yl)-N-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec- 2-yl]pentanamide   Ligand Explorer IOD Search  Download  I IODIDE ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) EV6 Search  Download  IC50: 8900 nM (100) - data from BindingDB   N/A in BindingMoad IC50: 8900 nM - data from PDBbind       External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Madden, J.,  Godemann, R.,  Smith, M.A.,  Hallett, D.,  Barker, J.,  Kraemer, J. Deposition:   2011-05-17 Release:   2011-06-01 Last Modified (REVDAT):   2011-09-07 Previous versions:  3MSM     Revision History    Hide Mouse over text for details 2011-09-07 Function and keywords 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.60 R-Value: 0.208 (obs.) R-Free: 0.261 Space Group: P 61 2 2 Unit Cell:   Length [Å] Angles [°] a = 101.88 α = 90.00  b = 101.88 β = 90.00  c = 170.18 γ = 120.00      Molecule of the Month Hide beta-Secretase Amyloid-beta Precursor Protein