RCSB Protein Data Bank - RCSB PDB - 3R5X Structure Summary

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Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis complexed with ATP

DOI:10.2210/pdb3r5x/pdb

3R5X

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Primary Citation

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Molecular Description

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Source

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Polymer: 1

Scientific Name:

Bacillus anthracis

Taxonomy

Common Name:

Anthrax,anthrax bacterium

Expression System:

Escherichia coli

Related PDB Entries Hide

Identifier Details

3R23 the same protein apo-form

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
ACY Search Download	C₂ H₄ O₂	ACETIC ACID		Ligand Explorer
ATP Search Download	C₁₀ H₁₆ N₅ O₁₃ P₃	ADENOSINE-5'-TRIPHOSPHATE		Ligand Explorer
CA Search Download	Ca	CALCIUM ION		Ligand Explorer
EDO Search Download	C₂ H₆ O₂	1,2-ETHANEDIOL		Ligand Explorer
MG Search Download	Mg	MAGNESIUM ION		Ligand Explorer

Modified Residues

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Identifier		Formula	Parent	Type
MSE Search		C₅ H₁₁ N O₂ Se	MET	lPeptideLinking

External Domain Annotations Hide
Pfam Classification: 7 Domains - data from Pfam

GO Terms: 10 Terms - data from GO
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 assigned by authors and generated by PISA (software)

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Deposition Summary

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Authors: Kim, Y., Mulligan, R., Hasseman, J., Anderson, W.F., Joachimiak, A., Csgid

Deposition:	2011-03-20
Release:	2011-04-06

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2011-07-13
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Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 56.34	α = 73.36
	b = 68.99	β = 84.96
	c = 92.39	γ = 75.46