3R1C

Crystal structure of GCGGCGGC duplex

Structural Biology Knowledgebase: 3R1C SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3R1C

Classification: RNA

Total Structure Weight: 94151.16

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*GP*CP*GP*GP*CP*GP*GP*C)-3') A, B, C... , D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

S, W, X, b, c, d, e SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.216
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.70 α = 89.98
b = 76.89 β = 88.61
c = 85.40 γ = 77.29

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2011-03-10
  • Released Date: 2011-06-01
  • Deposition author(s): Kiliszek, A., Kierzek, R., Krzyzosiak, W.J., Rypniewski, W.

Revision History

  • 2011-09-14
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4