RCSB Protein Data Bank - RCSB PDB - 3OMI Structure Summary

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Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides with D132A mutation

DOI:10.2210/pdb3omi/pdb

3OMI

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Classification:	Oxidoreductase
Structure Weight:	187877.38

Molecule:

Cytochrome c oxidase, aa3 type, subunit I

Polymer:

Type:

protein

Length:

535

Chains:

A, C

EC#:

Fragment:

UNP RESIDUES 17-551

Mutation:

D132A

Organism

Rhodobacter sphaeroides 2.4.1

Gene Names

coxI RHOS4_04590 RSP_1877

UniProtKB:

| | Q3J5A7

Molecule:

Cytochrome c oxidase subunit 2

Polymer:

Type:

protein

Length:

256

Chains:

B, D

EC#:

Fragment:

UNP RESIDUES 30-281

Organism

Rhodobacter sphaeroides 2.4.1

Gene Names

coxII RHOS4_04060 RSP_1826

UniProtKB:

| | Q3J5G0

Source

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Polymer: 1

Scientific Name:

Rhodobacter sphaeroides 2.4.1

Taxonomy

Expression System:

Rhodobacter sphaeroides

Polymer: 2

Scientific Name:

Rhodobacter sphaeroides 2.4.1

Taxonomy

Expression System:

Rhodobacter sphaeroides

Related PDB Entries

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Identifier	Details
2GSM	The wild type form of this mutant.
3OM3	The same kind protein crystal reduced with sodium dithionite.
3OMA
3OMN

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
CA Search Download	Ca	CALCIUM ION		Ligand Explorer
CD Search Download	Cd	CADMIUM ION		Ligand Explorer
CL Search Download	Cl	CHLORIDE ION		Ligand Explorer
CU Search Download	Cu	COPPER (II) ION		Ligand Explorer
CU1 Search Download	Cu	COPPER (I) ION		Ligand Explorer
DMU Search Download	C₂₂ H₄₂ O₁₁	DECYL-BETA-D-MALTOPYRANOSIDE		Ligand Explorer
FE Search Download	Fe	FE (III) ION		Ligand Explorer
HEA Search Download	C₄₉ H₅₆ Fe N₄ O₆	HEME-A		Ligand Explorer
HTH Search Download	C₇ H₁₆ O₃	(2S,3R)-heptane-1,2,3-triol		Ligand Explorer
MG Search Download	Mg	MAGNESIUM ION		Ligand Explorer
OH Search Download	H O	HYDROXIDE ION		Ligand Explorer
TRD Search Download	C₁₃ H₂₈	TRIDECANE		Ligand Explorer

External Domain Annotations Hide
Pfam Classification: 3 Domains - data from Pfam

GO Terms: 14 Terms - data from GO
Structural Biology Knowledgebase Data Hide