Poliovirus polymerase elongation complex
DOI:10.2210/pdb3ol6/pdb   NDB ID: NA0702
3OL6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/rna
    Structure Weight: 279545.30
    Molecule: Polymerase
    Polymer: 1 Type: protein Length: 471
    Chains: A, E, I, M
    EC#: 2.7.7.48   
    Fragment: UNP RESIDUES 1749-2209
    Mutation: L446D
    Organism: Human poliovirus 1
    UniProtKB: Protein Feature View | Search PDB | B3VQP5  
    Molecule: RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3')
    Polymer: 2 Type: rna Length: 26
    Chains: B, F, J, N
    Details: Template RNA
    Molecule: RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')
    Polymer: 3 Type: rna Length: 14
    Chains: C, G, K, O
    Details: Product RNA
    Molecule: RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')
    Polymer: 4 Type: rna Length: 9
    Chains: D, H, L, P
    Details: Nontemplate RNA
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Human poliovirus 1   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 4
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IPA
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    IPA C3 H8 O
    ISOPROPYL ALCOHOL
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA0702
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Gong, P.,  Peersen, O.B.

    Deposition:   2010-08-25
    Release:   2010-12-22
    Last Modified (REVDAT):   2011-01-12
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.50
    R-Value: 0.215 (obs.)
    R-Free: 0.269
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 60.40 α = 83.72 
    b = 60.41 β = 83.69 
    c = 191.43 γ = 77.85