3OG7

B-Raf Kinase V600E oncogenic mutant in complex with PLX4032


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 3OG7

Classification: TRANSFERASE

Total Structure Weight: 66445.41

Macromolecule Entities
Molecule Chains Length Organism Details
AKAP9-BRAF fusion protein A, B 289 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: Kinase domain (unp residues 1175-1446)
Mutation: K522A, I543A, I544S, I551K, Q562R, L588N, V600E, K630S, F667E, Y673S, A688R, L706S, Q709R, S713E, L716E, S720E
Gene Name(s): BRAF Gene View BRAF1 RAFB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
032
Query on 032

A N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3- b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane- 1-sulfonamide
PLX4032, (Synonym)
C23 H18 Cl F2 N3 O3 S
GPXBXXGIAQBQNI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
032 EC50: 2290 nM (93) BindingDB
IC50: 4 - 1140 nM (93) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.213
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.77 α = 90.00
b = 104.42 β = 90.00
c = 110.13 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-08-16
  • Released Date: 2010-09-22
  • Deposition author(s): Zhang, Y., Zhang, K.Y., Zhang, C.

Revision History

  • Version 1_0: 2010-09-22

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-10-25

    Type: Structure summary