3NIR

Crystal structure of small protein crambin at 0.48 A resolution

Structural Biology Knowledgebase: 3NIR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.48 Å
  • R-Value Observed: 0.127

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3NIR

Classification: PLANT PROTEIN

Total Structure Weight: 4922.74

Macromolecule Entities
Molecule Chains Length Organism Details
Crambin A 46 Crambe hispanica Mutation: P22S, L25I
Gene Name(s): THI2

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EOH
Query on EOH

A ETHANOL
C2 H6 O
LFQSCWFLJHTTHZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.48 Å
  • R-Value Observed: 0.127
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 22.33 α = 90.00
b = 18.47 β = 90.55
c = 40.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-16
  • Released Date: 2011-05-18
  • Deposition author(s): Schmidt, A., Teeter, M., Weckert, E., Lamzin, V.S.

Revision History

  • 2016-03-02
    Type: Sequence database correspondence | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4