3KPR

Crystal Structure of the LC13 TCR in complex with HLA B*4405 bound to EEYLKAWTF a mimotope


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 3KPR

Classification: IMMUNE SYSTEM

Total Structure Weight: 188869.16

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class I histocompatibility antigen, B-44 alpha chain A, F 276 Homo sapiens Fragment: UNP residues 25-300
Mutation: D116Y
Gene Name(s): HLA-B Gene View HLAB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B, G 99 Homo sapiens Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
EEYLKAWTF, mimotope peptide C, H 9 synthetic
LC13 TCR alpha chain D, I 201 Homo sapiens Gene Name(s): TRAC TCRA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
LC13 TCR beta chain E, J 241 Homo sapiens Gene Name(s): TRBC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.219
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 223.12 α = 90.00
b = 53.22 β = 102.39
c = 143.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-11-16
  • Released Date: 2009-12-22
  • Deposition author(s): Macdonald, W.A., Chen, Z., Gras, S., Archbold, J.K., Tynan, F.E., Clements, C.S., Bharadwaj, M., Kjer-Nielsen, L., Saunders, P.M., Wilce, M.C., Crawford, F., Stadinsky, B., Jackson, D., Brooks, A.G., Purcell, A.W., Kappler, J.W., Burrows, S.R., Rossjohn, J., McCluskey, J.

Revision History

  • Version 1_0: 2009-12-22

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-01

    Type: Refinement description