3JAE

Structure of alpha-1 glycine receptor by single particle electron cryo-microscopy, glycine-bound state


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.9 Å
  • Aggregation State: Particle
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 3JAE

Classification: SIGNALING PROTEIN

Total Structure Weight: 198329.78

Macromolecule Entities
Molecule Chains Length Organism Details
Glycine receptor subunit alphaZ1 A, B, C, D, E 342 Danio rerio Gene Name(s): glra1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: Cys-Loop Receptor Family

Protein Name: α1 GlyR Glycine receptor in complex with strychnine


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B, C, D, E N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.9 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-08
  • Released Date: 2015-09-09
  • Deposition author(s): Du, J., Lu, W., Wu, S.P., Cheng, Y.F., Gouaux, E.

Revision History

  • Version 1_0: 2015-09-09

    Type: Initial release

  • Version 1_1: 2015-09-23

    Type: Database references

  • Version 1_2: 2015-10-14

    Type: Database references