Structure of HIV-1 gp120 (core with V3) in Complex with CD4-Binding-Site Antibody F105 DOI:10.2210/pdb3hi1/pdb

3HI1   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Structural Protein/immune System Structure Weight: 172579.27 Molecule: Glycoprotein 120 Polymer: 1 Type: protein Length: 321 Chains: G, J Organism Human immunodeficiency virus type 1 (isolate YU2) Gene Name env UniProtKB:   Protein Feature View | Search PDB | P35961     Molecule: F105 Light Chain Polymer: 2 Type: protein Length: 215 Chains: A, L Organism Homo sapiens Molecule: F105 Heavy Chain Polymer: 3 Type: protein Length: 225 Chains: B, H Organism Homo sapiens     Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus type 1   Taxonomy   Common Name: Hiv-1 Expression System: Adenovirus   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human   Polymer: 3 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human       Ligand Chemical Component Hide Identifier Formula Name Interactions NAG Search  Download  C8 H15 N O6 N-ACETYL-D-GLUCOSAMINE   Ligand Explorer     External Domain Annotations Hide CATH Classification v3.4.0: 6 Domains - data from CATH   Pfam Classification: 11 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kwon, Y.D.,  Chen, L.,  Zhou, T.,  Wu, X.,  O'Dell, S.,  Cavacini, L.,  Hessell, A.J.,  Pancera, M.,  Tang, M.,  Xu, L.,  Yang, Z.,  Zhang, M.-Y.,  Arthos, J.,  Burton, D.R.,  Dimitrov, D.,  Nabel, G.J.,  Posner, M.,  Sodroski, J.,  Wyatt, R.,  Mascola, J.R.,  Kwong, P.D. Deposition:   2009-05-18 Release:   2009-11-17 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Non-polymer description 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.90 R-Value: 0.204 (obs.) R-Free: 0.243 Space Group: H 3 2 Unit Cell:   Length [Å] Angles [°] a = 412.40 α = 90.00  b = 412.40 β = 90.00  c = 83.21 γ = 120.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies Antibodies Hemagglutinin