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Crystal structure of Apo acid-beta-glucosidase pH 4.5
3GXD
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 228639.40
    Molecule: Glucosylceramidase
    Polymer: 1 Type: protein Length: 497
    Chains: A, B, C, D
    EC#: 3.2.1.45   
    Organism Homo sapiens
    Gene Names GBA GC GLUC
    UniProtKB:   Protein Feature View | Search PDB | P04062  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Cricetulus griseus  
     
  •   Related PDB Entries Hide
    Identifier Details
    3GXF  Structure of acid-beta-glucosidase with isofagomine at neutral pH 
    3GXI  Structure of acid-beta-glucosidase at pH 5.5 
    3GXM  Structure of acid-beta-glucosidase at pH 4.5 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    PO4
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    PO4 O4 P
    PHOSPHATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Lieberman, R.L.

    Deposition:   2009-04-02
    Release:   2009-05-05
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
    Version format compliance
    2011-07-13
    Non-polymer description
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.50
    R-Value: 0.208 (obs.)
    R-Free: 0.275
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 109.44 α = 90.00 
    b = 91.70 β = 111.04 
    c = 152.49 γ = 90.00