3FF8

Structure of NK cell receptor KLRG1 bound to E-cadherin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 3FF8

Classification: Cell Adhesion / Immune System

Total Structure Weight: 48901.88

Macromolecule Entities
Molecule Chains Length Organism Details
Epithelial cadherin A, B 101 Homo sapiens Fragment: UNP residues 155-254, Cadherin 1 domain
Mutation: C9L
Gene Name(s): CDH1 Gene View CDHE UVO
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Killer cell lectin-like receptor subfamily G member 1 C, D 114 Mus musculus Fragment: UNP residues 75-188, C-type lectin domain
Gene Name(s): Klrg1 Mafa
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.212
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.78 α = 90.00
b = 90.53 β = 90.00
c = 107.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-12-02
  • Released Date: 2009-07-28
  • Deposition author(s): Li, Y., Mariuzza, R.A.

Revision History

  • Version 1_0: 2009-07-28

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-01

    Type: Advisory, Refinement description