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Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis in complex with the DNA operator
 
 
DOI:10.2210/pdb3ere/pdb   NDB ID: PD1188
3ERE
 
Primary Citation
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  •  
    Move Section Molecular Description Hide
    Classification: DNA Binding Protein/dna
    Structure Weight: 27449.46
     
    Molecule:Arginine repressor
    Polymer:1Type:polypeptide(L)Length:170
    Chains:D
    Molecule:5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DAP*DAP*DCP*DGP*DAP*DTP*DGP*DCP*DAP*DA)-3'
    Polymer:2Type:polydeoxyribonucleotideLength:16
    Chains:A
    Other Details:ArgR box DNA segment, strand A
    Molecule:5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DCP*DGP*DTP*DTP*DAP*DTP*DGP*DCP*DAP*DA)-3'
    Polymer:3Type:polydeoxyribonucleotideLength:16
    Chains:B
    Other Details:ArgR box DNA segment, strand B
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Mycobacterium tuberculosis h37rv Go to NCBI Taxonomy entry Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    2ZFZ  Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis in complex with arginine 
    3BUE  Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis 
    3CAG  Crystal structure of the oligomerization domain hexamer of the arginine repressor protein from Mycobacterium tuberculosis in complex with 9 arginines. 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    SO4     SULFATE ION O4 S 3DLigand Explorer Link out to Ligand Expos:SO4 Link out to SuperLigands:SO4 Link out to SuperHapten:SO4
     
     
  •  
    Move Section Derived Data Hide
     
     
 
< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Cherney, L.T.,   Cherney, M.M.,   Garen, C.R.,   Lu, G.J.,   James, M.N.,   TB Structural Genomics Consortium (TBSGC)

    Deposition:   2008-10-01
    Release:   2008-10-14
    Last Modified (REVDAT):   2009-11-17
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.50
    R-Value: 0.227 (obs.)
    R-Free: 0.255
    Space Group: P 63 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 94.13 α = 90.00 
    b = 94.13 β = 90.00 
    c = 147.01 γ = 120.00