3EDL

Kinesin13-Microtubule Ring complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 28.0 Å
  • Aggregation State: Filament
  • Reconstruction Method: Helical

Literature

Macromolecules
Sequence Display for 3EDL

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 241021.42

Macromolecule Entities
Molecule Chains Length Organism Details
Alpha-tubulin A 451 Bos taurus
Beta tubulin B, G 445 Bos taurus
Kinesin13 Motor domain D 331 Drosophila melanogaster
Alpha-tubulin F 451 Bos taurus Gene Name(s): TUBA1D
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 7 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TA1
Query on TA1

B TAXOL
C47 H51 N O14
RCINICONZNJXQF-MZXODVADSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GTP
Query on GTP

B, F GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ANP
Query on ANP

D PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GDP
Query on GDP

B, F GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CN2
Query on CN2

G 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO- 5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE
C22 H25 N O6 S
TYDIWMTWTXFWSY-HNNXBMFYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, D, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 28.0 Å
  • Reconstruction Method: Helical

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-03
  • Released Date: 2009-01-20
  • Deposition author(s): Tan, D., Rice, W.J., Sosa, H.

Revision History

  • Version 1_0: 2009-01-20

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance