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Structure of the ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2 reveals a dimeric GTPase
3D6T
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 20270.61
    Molecule: Leucine-rich repeat serine/threonine-protein kinase 2
    Polymer: 1 Type: protein Length: 171
    Chains: B
    EC#: 2.7.11.1   
    Fragment: Miro domain
    Organism: Homo sapiens
    Gene Names: Gene View for LRRK2 PARK8
    UniProtKB: Protein Feature View | Search PDB | Q5S007  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GDP
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    GDP C10 H15 N5 O11 P2
    GUANOSINE-5'-DIPHOSPHATE
    GDP:3D6T
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Deng, J.

    Deposition:   2008-05-20
    Release:   2008-06-10
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.43
    R-Value: 0.216 (obs.)
    R-Free: 0.307
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 69.92 α = 90.00 
    b = 53.17 β = 112.76 
    c = 42.74 γ = 90.00