3BLL

TGT mutant in complex with Boc-preQ1

Structural Biology Knowledgebase: 3BLL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.26 Å
  • R-Value Free: 0.182
  • R-Value Work: 0.149

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3BLL

Classification: TRANSFERASE

Total Structure Weight: 43500.96

Macromolecule Entities
Molecule Chains Length Organism Details
Queuine tRNA-ribosyltransferase A 386 Zymomonas mobilis EC#: 2.4.2.29 IUBMB
Mutation: Y106F, C158V, A232S, V233G, T312K
Gene Name(s): tgt ZMO0363

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BPQ
Query on BPQ

A tert-butyl [(2-amino-4-oxo-4,7-dihydro-3H- pyrrolo[2,3-d]pyrimidin-5-yl)methyl]carbamate
C12 H17 N5 O3
RXVQMCMIOHBKNE-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
GOL
Query on GOL

A GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.26 Å
  • R-Value Free: 0.182
  • R-Value Work: 0.149
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.95 α = 90.00
b = 64.85 β = 95.56
c = 70.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-12-11
  • Released Date: 2008-12-16
  • Deposition author(s): Tidten, N., Heine, A., Reuter, K., Klebe, G.

Revision History

  • 2013-07-17
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4