3AX2

Crystal structure of rat TOM20-ALDH presequence complex: a disulfide-tethered complex with a non-optimized, long linker

Structural Biology Knowledgebase: 3AX2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3AX2

Classification: MEMBRANE PROTEIN / TRANSPORT PROTEIN

Total Structure Weight: 38426.13

Macromolecule Entities
Molecule Chains Length Organism Details
Mitochondrial import receptor subunit TOM20 homolog A, C, E, G 73 Rattus norvegicus Fragment: CYTOSOLIC DOMAIN, UNP RESIDUES 59-126
Gene Name(s): Tomm20
Aldehyde dehydrogenase, mitochondrial B, D, F, H 16 Rattus norvegicus EC#: 1.2.1.3 IUBMB
Fragment: UNP RESIDUES 12-20
Gene Name(s): Aldh2

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

B, D PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
NH2
Query on NH2
B, D, F, H NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.188
  • Space Group: P 31
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.49 α = 90.00
b = 61.49 β = 90.00
c = 98.34 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-28
  • Released Date: 2011-07-06
  • Deposition author(s): Saitoh, T., Maita, Y., Kohda, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4