3AI0

Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with para-nitrophenyl-beta-D-glucopyranoside


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.153
  • R-Value Work: 0.122

Literature

Macromolecules
Sequence Display for 3AI0

Classification: HYDROLASE

Total Structure Weight: 56004.84

Macromolecule Entities
Molecule Chains Length Organism Details
beta-glucosidase A 487 Neotermes koshunensis EC#: 3.2.1.21 IUBMB
Mutation: E193D
Gene Name(s): NkBG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PNW
Query on PNW

A 4-nitrophenyl beta-D-glucopyranoside
4'-NITROPHENYL-BETA-D-GLUCOPYRANOSIDE (Synonym)
C12 H15 N O8
IFBHRQDFSNCLOZ-RMPHRYRLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.153
  • R-Value Work: 0.122
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 93.09 α = 90.00
b = 68.75 β = 95.68
c = 75.75 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-05-06
  • Released Date: 2010-08-18
  • Deposition author(s): Jeng, W.-Y., Liu, C.-I., Wang, A.H.-J.

Revision History

  • Version 1_0: 2010-08-18

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance