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Bovine Heart Cytochrome c Oxidase in the Cyanide Ion-bound Fully Reduced State at 100 K
3AG4
Primary Citation
 
 
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Molecular Description Hide
    Classification: Oxidoreductase
    Structure Weight: 442811.82
    Molecule: Cytochrome c oxidase subunit 1
    Polymer: 1 Type: protein Length: 514
    Chains: A, N
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names MT-CO1 COI COXI MTCO1
    UniProtKB:   Protein Feature View | Search PDB | P00396  
    Molecule: Cytochrome c oxidase subunit 2
    Polymer: 2 Type: protein Length: 227
    Chains: B, O
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names MT-CO2 COII COXII MTCO2
    UniProtKB:   Protein Feature View | Search PDB | P68530  
    Molecule: Cytochrome c oxidase subunit 3
    Polymer: 3 Type: protein Length: 261
    Chains: C, P
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names MT-CO3 COIII COXIII MTCO3
    UniProtKB:   Protein Feature View | Search PDB | P00415  
    Molecule: Cytochrome c oxidase subunit 4 isoform 1
    Polymer: 4 Type: protein Length: 147
    Chains: D, Q
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX4I1 COX4
    UniProtKB:   Protein Feature View | Search PDB | P00423  
    Molecule: Cytochrome c oxidase subunit 5A
    Polymer: 5 Type: protein Length: 109
    Chains: E, R
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Name COX5A
    UniProtKB:   Protein Feature View | Search PDB | P00426  
    Molecule: Cytochrome c oxidase subunit 5B
    Polymer: 6 Type: protein Length: 98
    Chains: F, S
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Name COX5B
    UniProtKB:   Protein Feature View | Search PDB | P00428  
    Molecule: Cytochrome c oxidase subunit 6A2
    Polymer: 7 Type: protein Length: 85
    Chains: G, T
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX6A2 COX6A
    UniProtKB:   Protein Feature View | Search PDB | P07471  
    Molecule: Cytochrome c oxidase subunit 6B1
    Polymer: 8 Type: protein Length: 85
    Chains: H, U
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX6B1 COX6B
    UniProtKB:   Protein Feature View | Search PDB | P00429  
    Molecule: Cytochrome c oxidase subunit 6C
    Polymer: 9 Type: protein Length: 73
    Chains: I, V
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Name COX6C
    UniProtKB:   Protein Feature View | Search PDB | P04038  
    Molecule: Cytochrome c oxidase polypeptide 7A1
    Polymer: 10 Type: protein Length: 59
    Chains: J, W
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX7A1 COX7A COX7AH
    UniProtKB:   Protein Feature View | Search PDB | P07470  
    Molecule: Cytochrome c oxidase subunit 7B
    Polymer: 11 Type: protein Length: 56
    Chains: K, X
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Name COX7B
    UniProtKB:   Protein Feature View | Search PDB | P13183  
    Molecule: Cytochrome c oxidase subunit 7C
    Polymer: 12 Type: protein Length: 47
    Chains: L, Y
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX7C COX7CP1
    UniProtKB:   Protein Feature View | Search PDB | P00430  
    Molecule: Cytochrome c oxidase subunit 8B
    Polymer: 13 Type: protein Length: 46
    Chains: M, Z
    EC#: 1.9.3.1   
    Organism Bos taurus
    Gene Names COX8B COX8H
    UniProtKB:   Protein Feature View | Search PDB | P10175  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 2
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 3
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 4
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 5
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 6
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 7
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 8
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 9
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 10
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 11
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 12
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
    Polymer: 13
    Scientific Name: Bos taurus   Taxonomy   Common Name: Bovine  
     
  •   Related PDB Entries Hide
    Identifier Details
    1occ   
    1oco   
    1ocr   
    1ocz   
    1v54   
    1v55   
    2dyr   
    2dys   
    2eij   
    2eik   
    2eil   
    2eim   
    2ein   
    2occ   
    2zxw   
    3abk   
    3abl   
    3abm   
    3AG1   
    3AG2   
    3AG3   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    CDL
    Search 
    Download      		CDL C81 H156 O17 P2
    CARDIOLIPIN
    CHD
    Search 
    Download      		CHD C24 H40 O5
    CHOLIC ACID
    CU
    Search 
    Download      		CU Cu
    COPPER (II) ION
    CUA
    Search 
    Download      		CUA Cu2
    DINUCLEAR COPPER ION
    CYN
    Search 
    Download      		CYN C N
    CYANIDE ION
    DMU
    Search 
    Download      		DMU C22 H42 O11
    DECYL-BETA-D-MALTOPYRANOSIDE
    HEA
    Search 
    Download      		HEA C49 H56 Fe N4 O6
    HEME-A
    MG
    Search 
    Download      		MG Mg
    MAGNESIUM ION
    NA
    Search 
    Download      		NA Na
    SODIUM ION
    PEK
    Search 
    Download      		PEK C43 H78 N O8 P
    (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}- 1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)- ICOSA-5,8,11,14-TETRAENOATE
    PGV
    Search 
    Download      		PGV C40 H77 O10 P
    (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}- 1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC- 11-ENOATE
    PSC
    Search 
    Download      		PSC C42 H81 N O8 P
    (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9- OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA- 4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4- OXIDE
    TGL
    Search 
    Download      		TGL C57 H110 O6
    TRISTEAROYLGLYCEROL
    UNX
    Search 
    Download      		UNX X
    UNKNOWN ATOM OR ION
    ZN
    Search 
    Download      		ZN Zn
    ZINC ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    FME
    Search      		FME C6 H11 N O3 S MET lPeptideLinking
    TPO
    Search      		TPO C4 H10 N O6 P THR lPeptideLinking
    SAC
    Search      		SAC C5 H9 N O4 SER lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors
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