Crystal structure of CMP kinase: insights into initial substrate recognition and reaction mechanisms
Mega, R., Nakagawa, N., Masui, R., Kuramitsu, S.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytidylate kinase | 208 | Thermus thermophilus HB8 | Mutation(s): 0  Gene Names: TTHA0458 EC: 2.7.4.25 | ||
UniProt | |||||
Find proteins for Q5SL35 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SL35  Go to UniProtKB:  Q5SL35 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5SL35 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
C5P Query on C5P | B [auth A] | CYTIDINE-5'-MONOPHOSPHATE C9 H14 N3 O8 P IERHLVCPSMICTF-XVFCMESISA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 49.212 | α = 90 |
b = 49.212 | β = 90 |
c = 98.051 | γ = 120 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
SOLVE | phasing |
RESOLVE | phasing |
CNS | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |