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Structural insights into RISC assembly facilitated by dsRNA binding domains of human RNA helicase A (DHX9)
DOI:10.2210/pdb3vyy/pdb   NDB ID: NA2071
3VYY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 36602.60
    Molecule: ATP-dependent RNA helicase A
    Polymer: 1 Type: protein Length: 91
    Chains: A, B
    EC#: 3.6.4.13   
    Fragment: UNP residues 1-91
    Organism: Homo sapiens
    Gene Names: Gene View for DHX9 DDX9 LKP NDH2
    UniProtKB: Protein Feature View | Search PDB | Q08211  
    Molecule: RNA (5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3')
    Polymer: 2 Type: rna Length: 10
    Chains: C, D, E, F, G
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3VYX  RHA dsRBD2/dsRNA complex 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2071
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Yuan, Y.A.,  Fu, Q.

    Deposition:   2012-10-05
    Release:   2013-02-13
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.90
    R-Value: 0.221 (obs.)
    R-Free: 0.262
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 52.25 α = 90.00 
    b = 78.53 β = 98.81 
    c = 112.24 γ = 90.00