Crystal structure of Enterococcus hirae V1-ATPase [eV1]
3VR4
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 399405.38
    Molecule: V-type sodium ATPase catalytic subunit A
    Polymer: 1 Type: protein Length: 600
    Chains: A, B, C
    EC#: 3.6.3.15   
    Organism: Enterococcus hirae
    Gene Names: ntpA EHR_08260
    UniProtKB: Protein Feature View | Search PDB | Q08636  
    Molecule: V-type sodium ATPase subunit B
    Polymer: 2 Type: protein Length: 465
    Chains: D, E, F
    EC#: 3.6.3.15   
    Organism: Enterococcus hirae
    Gene Names: ntpB EHR_08265
    UniProtKB: Protein Feature View | Search PDB | Q08637  
    Molecule: V-type sodium ATPase subunit D
    Polymer: 3 Type: protein Length: 217
    Chains: G
    EC#: 3.6.3.15   
    Organism: Enterococcus hirae
    Gene Names: ntpD EHR_08270
    UniProtKB: Protein Feature View | Search PDB | P43435  
    Molecule: V-type sodium ATPase subunit G
    Polymer: 4 Type: protein Length: 115
    Chains: H
    EC#: 3.6.3.15   
    Organism: Enterococcus hirae
    Gene Names: ntpG ntpQ EHR_08255
    UniProtKB: Protein Feature View | Search PDB | P43455  
    Membrane Protein:   Source: mpstruc
    ALPHA-HELICAL
    Bacterial V-type ATPase
    Rotor of V-type Na+-ATPase
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis  
    Polymer: 2
    Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis  
    Polymer: 3
    Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis  
    Polymer: 4
    Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis  
     
  •   Related PDB Entries Hide
    Identifier Details
    3VR2    
    3VR3    
    3VR5    
    3VR6    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    B3P
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    B3P C11 H26 N2 O6
    2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3- DIOL
    CL
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    CL Cl
    CHLORIDE ION
    GOL
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    GOL C3 H8 O3
    GLYCEROL
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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