Structural insights into small RNA sorting and mRNA binding by Arabidopsis Ago domains
Primary Citation
  •   Molecular Description Hide
    Classification: RNA Binding Protein
    Structure Weight: 17997.93
    Molecule: Protein argonaute 1
    Polymer: 1 Type: protein Length: 155
    Chains: A
    Fragment: Mid domain, UNP residues 592-739
    Mutation: ASP:689, SER:688, LYS:687A, LYS:686
    Organism: Arabidopsis thaliana
    Gene Names: At1g48410 F11A17.3 T1N15.2 Gene View for AGO1
    UniProtKB: Search PDB | O04379   Protein Feature View
  •   Structure Validation Hide

  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Arabidopsis thaliana   Taxonomy   Common Name: Mouse-ear cress Expression System: Escherichia coli  
  •   Related PDB Entries Hide
    Identifier Details
    3VNA   Crystal structure of Arabidopsis Ago1 domain 
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4 O4 S
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Yuan, Y.A.,  Zha, X.

    Deposition:   2012-01-11
    Release:   2012-10-10
  •   Revision History    Hide
    No revisions since initial release
  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.50
    R-Value: 0.189 (obs.)
    R-Free: 0.215
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 36.87 α = 90.00 
    b = 61.10 β = 90.00 
    c = 67.08 γ = 90.00