3UKR

Crystal structure of Bos taurus Arp2/3 complex with bound inhibitor CK-666

Structural Biology Knowledgebase: 3UKR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 3UKR

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 224498.91

Macromolecule Entities
Molecule Chains Length Organism Details
Actin-related protein 3 A 418 Bos taurus Gene Name(s): ACTR3 Gene View ARP3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2 B 394 Bos taurus Gene Name(s): ACTR2 Gene View ARP2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2/3 complex subunit 1B C 372 Bos taurus Gene Name(s): ARPC1B Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2/3 complex subunit 2 D 300 Bos taurus Gene Name(s): ARPC2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2/3 complex subunit 3 E 178 Bos taurus Gene Name(s): ARPC3 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2/3 complex subunit 4 F 168 Bos taurus Gene Name(s): ARPC4 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Actin-related protein 2/3 complex subunit 5 G 151 Bos taurus Gene Name(s): ARPC5 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CKH
Query on CKH

B 2-fluoro-N-[2-(2-methyl-1H-indol-3-yl)ethyl]benzamide
C18 H17 F N2 O
UXRKUKRXVWJFER-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
CKH N/A in BindingDB
IC50: 12000 nM  BindingMOAD
IC50: 12000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.221
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 111.19 α = 90.00
b = 129.69 β = 90.00
c = 204.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-09
  • Released Date: 2013-02-13
  • Deposition author(s): Nolen, B.J., Han, M.

Revision History

  • 2013-02-27
    Type: Citation | Details: Citation update