Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-4 DOI:10.2210/pdb3t5e/pdb   NDB ID: NA1249

3T5E   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: DNA Structure Weight: 8014.10 Molecule: human telomeric DNA sequence Polymer: 1 Type: dna Length: 22 Chains: A     Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 1KF1  Equivalent native G-quadruplex  3SC8  Same G-quadruplex bound by a related naphthalene diimide compound BMSG-SH1      Ligand Chemical Component Hide Identifier Formula Name Interactions K Search  Download  K POTASSIUM ION   Ligand Explorer T5E Search  Download  C50 H80 N12 O4 2,7-bis[4-(4-methylpiperazin-1-yl)butyl]- 4,9-bis{[4-(4-methylpiperazin-1-yl)butyl]amino}benzo[lmn][3,8]phenanthroline- 1,3,6,8(2H,7H)-tetrone   Ligand Explorer     Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: NA1249     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Collie, G.W.,  Promontorio, R.,  Parkinson, G.N. Deposition:   2011-07-27 Release:   2012-02-15 Last Modified (REVDAT):   2012-02-22     Revision History    Hide Mouse over text for details 2012-02-22 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.10 R-Value: 0.245 (obs.) R-Free: 0.282 Space Group: P 6 Unit Cell:   Length [Å] Angles [°] a = 63.03 α = 90.00  b = 63.03 β = 90.00  c = 42.39 γ = 120.00