Macromolecules
Sequence Display for 3PNW

Classification: PROTEIN BINDING / IMMUNE SYSTEM

Total Structure Weight: 480293.69

Macromolecule Entities
Molecule Chains Length Organism Details
FAB light chain A, D, G..., J, M, P, S, VA, D, G, J, M, P, S, V 228 Homo sapiens Synthetic construct
FAB heavy chain B, E, H..., K, N, Q, T, WB, E, H, K, N, Q, T, W 246 Homo sapiens Synthetic construct
Tudor domain-containing protein 3 C, F, I..., L, O, R, U, XC, F, I, L, O, R, U, X 77 Homo sapiens Gene Name(s): TDRD3 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UNX
Query on UNX

A, B, C, D, E, F, G, H, I, J, K, M, N, P, Q, R, S, T, V, W UNKNOWN ATOM OR ION
X
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.223
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 76.71 α = 80.96
b = 93.73 β = 82.82
c = 159.93 γ = 90.06

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-19
  • Released Date: 2010-12-01
  • Deposition author(s): Loppnau, P., Tempel, W., Wernimont, A.K., Lam, R., Ravichandran, M., Adams-Cioaba, M.A., Persson, H., Sidhu, S.S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Cossar, D., Structural Genomics Consortium (SGC)

Revision History

  • Version 1_0: 2010-12-01

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2012-12-05

    Type: Database references

  • Version 1_3: 2013-01-09

    Type: Database references

  • Version 1_4: 2013-02-20

    Type: Database references

  • Version 1_5: 2013-09-18

    Type: Database references

  • Version 1_6: 2013-09-25

    Type: Source and taxonomy