3PGW

Crystal structure of human U1 snRNP

Structural Biology Knowledgebase: 3PGW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.4 Å
  • R-Value Free: 0.348
  • R-Value Work: 0.299

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3PGW

Classification: splicing / DNA / RNA

Total Structure Weight: 464107.84


Macromolecule Entities
Molecule Chains Length Organism Details
U1-A A, P 282 Homo sapiens Gene Name(s): SNRPA Gene View
U1-70K L, S 437 Homo sapiens Gene Name(s): SNRNP70 Gene View RNPU1Z RPU1 SNRP70 U1AP1
Sm-D3 W, Z 126 Homo sapiens Gene Name(s): SNRPD3 Gene View
Sm B B, Q 231 Homo sapiens Gene Name(s): SNRPB Gene View COD SNRPB1
Sm-D1 U, X 119 Homo sapiens Gene Name(s): SNRPD1 Gene View
Sm-D2 V, Y 118 Homo sapiens Gene Name(s): SNRPD2 Gene View SNRPD1 Gene View
Sm-F F, I 86 Homo sapiens Gene Name(s): SNRPF Gene View PBSCF
Sm-E E, H 92 Homo sapiens Gene Name(s): SNRPE Gene View
Sm G G, J 76 Homo sapiens Gene Name(s): SNRPG Gene View PBSCG
Macromolecule Entities
Molecule Chains Length Organism Details
U1 snRNA N, R 164 Homo sapiens
DNA 5'-D(*AP*GP*GP*TP*AP*AP*GP*TP*A)-3' D, M 9 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.4 Å
  • R-Value Free: 0.348
  • R-Value Work: 0.299
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 358.42 α = 90.00
b = 88.22 β = 111.88
c = 150.90 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2010-11-02
  • Released Date: 2010-12-29
  • Deposition author(s): Weber, G., Trowitzsch, S., Kastner, B., Luehrmann, R., Wahl, M.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4