3ORH

Human guanidinoacetate N-methyltransferase with SAH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.209 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

The crystal structure of human guanidinoacetate N-methyltransferase with SAH

Wu, H.Dong, A.Zeng, H.Loppnau, P.Sundstrom, M.Arrowsmith, C.H.Edwards, A.M.Bochkarev, A.Plotnikov, A.N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Guanidinoacetate N-methyltransferase
A, B, C, D
236Homo sapiensMutation(s): 0 
Gene Names: GAMT
EC: 2.1.1.2
UniProt & NIH Common Fund Data Resources
Find proteins for Q14353 (Homo sapiens)
Explore Q14353 
Go to UniProtKB:  Q14353
PHAROS:  Q14353
GTEx:  ENSG00000130005 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ14353
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.209 
  • Space Group: P 64
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 200.327α = 90
b = 200.327β = 90
c = 52.06γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
BUSTER-TNTrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing
BUSTERrefinement

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-09-15
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2023-09-06
    Changes: Data collection, Database references, Derived calculations, Refinement description