3NMA

Mutant P169S of Foot-and-mouth disease Virus RNA dependent RNA-polymerase

Structural Biology Knowledgebase: 3NMA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.221

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3NMA

Classification: TRANSFERASE / RNA

Total Structure Weight: 54959.59


Macromolecule Entities
Molecule Chains Length Organism Details
3D polymerase A 476 Foot-and-mouth disease virus Mutation: P169S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP*C)-3' B 3 synthetic
5'-R(P*CP*C)-3' C 2 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.221
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 93.83 α = 90.00
b = 93.83 β = 90.00
c = 121.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-22
  • Released Date: 2011-05-25
  • Deposition author(s): Agudo, R., Ferrer-Orta, C., Arias, A., Perez-Luque, R., Verdaguer, N., Domingo, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4