3NKX

Impaired binding of 14-3-3 to Raf1 is linked to Noonan and LEOPARD syndrome

Structural Biology Knowledgebase: 3NKX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 3NKX

Classification: PROTEIN BINDING SIGNALING PROTEIN

Total Structure Weight: 58045.02

Macromolecule Entities
Molecule Chains Length Organism Details
14-3-3 protein zeta/delta A, B 245 Homo sapiens Gene Name(s): YWHAZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Peptide of RAF proto-oncogene serine/threonine-protein kinase P, Q 10 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: phosphorylated C-Raf peptide, UNP residues 255-264
Gene Name(s): RAF1 Gene View RAF
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PPI
Query on PPI

A PROPANOIC ACID
C3 H6 O2
XBDQKXXYIPTUBI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SEP
Query on SEP
P, Q L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.204
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 72.41 α = 90.00
b = 83.85 β = 90.00
c = 111.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-21
  • Released Date: 2010-09-15
  • Deposition author(s): Schumacher, B., Weyand, M., Ottmann, C.

Revision History

  • 2014-02-26
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4