3NJ1

X-ray crystal structure of the PYL2(V114I)-pyrabactin A complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 3NJ1

Classification: HORMONE RECEPTOR

Total Structure Weight: 22373.95

Macromolecule Entities
Molecule Chains Length Organism Details
Abscisic acid receptor PYL2 A 193 Arabidopsis thaliana Mutation: V114I
Gene Name(s): PYL2 RCAR14 At2g26040 T19L18.15
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PYV
Query on PYV

A 4-bromo-N-(pyridin-2-ylmethyl)naphthalene- 1-sulfonamide
Pyrabactin (Synonym)
C16 H13 Br N2 O2 S
GJSDYQXOSHKOGX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
P2M
Query on P2M

A N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide
C16 H14 N2 O2 S
LYUIYUXDRYTIOE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.195
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 61.75 α = 90.00
b = 61.75 β = 90.00
c = 222.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-16
  • Released Date: 2010-08-18
  • Deposition author(s): Peterson, F.C., Burgie, E.S., Bingman, C.A., Volkman, B.F., Phillips Jr., G.N., Cutler, S.R., Jensen, D.R., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • Version 1_0: 2010-08-18

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-08

    Type: Refinement description