3N42

Crystal structures of the mature envelope glycoprotein complex (furin cleavage) of Chikungunya virus.

Structural Biology Knowledgebase: 3N42 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.247

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3N42

Classification: VIRAL PROTEIN

Total Structure Weight: 99074.23

Macromolecule Entities
Molecule Chains Length Organism Details
E3 envelope glycoprotein A 65 Chikungunya virus Fragment: polyprotein fragment residues 266-319
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
E2 envelope glycoprotein B 360 Chikungunya virus Fragment: polyprotein fragment residues 330-667
Gene Name(s):
E1 envelope glycoprotein F 473 Chikungunya virus Fragment: polyprotein fragment residues 810-1202
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

B, F N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDG
Query on NDG

F 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.247
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.39 α = 90.00
b = 90.68 β = 90.00
c = 178.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-05-21
  • Released Date: 2010-12-01
  • Deposition author(s): Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4